PDB data

PDB entry related queries

Q_ENTRY_KB_ANNOTATIONS

Cypher query to retrieve PDBe-KB partner annotations for a PDB entry.

MATCH
    (entry:Entry {ID:$entry_id})<-[:FUNPDBE_DATA_RELATED_TO]-
    (funpdb_entry:FunPDBeEntry)-[:HAS_EVIDENCE_CODE]->
    (evidence_code:EvidenceCodeOntology),
    (funpdb_entry)<-[:FUNPDBE_RESIDUE_GROUP_OF]-(funpdbe_group:FunPDBeResidueGroup)
RETURN
    funpdb_entry.DATA_RESOURCE, funpdb_entry.RELEASE_DATE,
    funpdb_entry.RESOURCE_ENTRY_URL, COLLECT(DISTINCT evidence_code.ECO_CODE),
    COLLECT(DISTINCT funpdbe_group.LABEL)